rs294542 chr15:94307009 T>A
- Sequence
gatctcgaaagtcgtacctcaata[T/A]gtgatggtgtgtcagagaggcagg
- ASB in cell types
- GM12878 (female B-cells) HepG2 (hepatoblastoma) germinal center B-cells
- ASB for transcription factors
- CREB1_HUMAN ATF7_HUMAN ATF2_HUMAN JUNB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 0.29 | 2.57 | 1.42 | n/a | No Hit | |||
| ATF7_HUMAN | 0.46 | 3.23 | 1.61 | n/a | n/a | |||
| ATF2_HUMAN | 0.75 | 1.90 | 1.67 | n/a | No Hit | |||
| JUNB_HUMAN | 1.70 | n/a | 1.33 | n/a | No Hit | |||
| BCL6_HUMAN | 1.69 | 0.83 | 2.00 | n/a | No Hit |
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