rs29546 chr5:133423942 G>A
- Sequence
cgcacgtgagctggagcccagcat[G/A]gagctgaggaacagcgctggggtc
- ASB in cell types
- A549 (lung carcinoma) K562 (myelogenous leukemia) cranial neural crest cells hepatocytes
- ASB for transcription factors
- COT1_HUMAN SMC3_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | 2.64 | 0.19 | 2.00 | n/a | No Hit | |||
| SMC3_HUMAN | 1.09 | -0.03 | 1.92 | n/a | n/a | |||
| RAD21_HUMAN | 1.10 | 0.31 | 1.72 | n/a | n/a |
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