rs2958127 chr12:56720523 A>T
- Sequence
gaatgatctacagaaatggtcttc[A/T]ctgtagggtctgacaaagcactag
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.82 | -0.14 | 2.00 | |||
| HEK293 (embryonic kidney) | -0.17 | 0.52 | 1.98 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, barnes akathisia rating scale, diastolic blood pressure (dbp)
GTEx eQTL Artery_Tibial, Brain_Caudate_basal_ganglia, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Pancreas, Testis, Whole_Blood