ADASTRA v1.6.10
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rs296000
chr5:169100003
T
>
G
Sequence
cctggggagcagatgtcagagaga[T/G]gactggcctttagcttggaacgcc
ASB in cell types
LHSAR (prostate epithelial cells)
SK-N-SH (neuroblastoma)
A549 (lung carcinoma)
ASB for transcription factors
ANDR_HUMAN
EP300_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
2.54
0.21
5.8·10
-14
1.00
1.67
n/a
No Hit
EP300_HUMAN
1.40
-0.80
0.03
1.00
1.33
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
chronic kidney disease
,
homa-b
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)