rs296000 chr5:169100003 T>G
- Sequence
cctggggagcagatgtcagagaga[T/G]gactggcctttagcttggaacgcc
- ASB in cell types
- LHSAR (prostate epithelial cells) SK-N-SH (neuroblastoma) A549 (lung carcinoma)
- ASB for transcription factors
- ANDR_HUMAN EP300_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.54 | 0.21 | 1.67 | n/a | No Hit | |||
| EP300_HUMAN | 1.40 | -0.80 | 1.33 | n/a | n/a |
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