rs2965156 chr19:44685157 G>C
- Sequence
gcagccatgattaagttcaggatc[G/C]tgctttggggagattatcctggat
- ASB in cell types
- A549 (lung carcinoma) HEK293 (embryonic kidney) GM23248 upper lobe of left lung
- ASB for transcription factors
- JUN_HUMAN GCR_HUMAN ZN629_HUMAN BCL3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.11 | 0.21 | 1.58 | n/a | No Hit | |||
| GCR_HUMAN | 2.55 | n/a | 2.00 | n/a | No Hit | |||
| ZN629_HUMAN | 1.93 | -2.18 | 1.33 | n/a | n/a | |||
| BCL3_HUMAN | 1.20 | -0.38 | 1.67 | n/a | n/a | |||
| CREB1_HUMAN | 1.37 | -1.07 | 1.67 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Lung, Pituitary, Skin_Sun_Exposed_Lower_leg, Thyroid