rs2965205 chr19:2599151 C>T
- Sequence
ggggcgtgccgctggttgctccgc[C/T]gcagacaccacgtggtgctttttg
- ASB in cell types
- GM12878 (female B-cells) sigmoid colon breast tumor tissue CD14+ monocytes
- ASB for transcription factors
- FOXK2_HUMAN ESR1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -0.82 | 2.50 | 1.33 | n/a | n/a | |||
| ESR1_HUMAN | n/a | 2.53 | 2.50 | n/a | No Hit | |||
| STAT1_HUMAN | n/a | 2.00 | 2.50 | n/a | No Hit |
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