ADASTRA v1.6.10
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adastra.autosome.org
rs2966560
chr3:108626796
A
>
G
Sequence
gagttatgaaggaaactagagtga[A/G]taactaaagtgtttcctggaggct
ASB in cell types
VCaP (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
VCaP (prostate carcinoma)
-2.85
2.14
1.00
0.02
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
ldl cholesterol
,
total cholesterol change with statins
,
waist hip ratio
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Lung
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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