rs2977230 chr1:17250823 T>C
- Sequence
cagatgtgtctccggtttgacctg[T/C]cccaggaagcctgggcctggctcc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) primary endothelial colony-forming cells
- ASB for transcription factors
- TAL1_HUMAN NFIB_HUMAN MNT_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | -2.03 | 1.88 | 1.50 | n/a | No Hit | |||
| NFIB_HUMAN | -0.76 | 2.15 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -3.32 | 2.32 | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 0.83 | 1.76 | 2.05 | n/a | No Hit |
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