rs298570 chr5:17290384 C>T
- Sequence
tgacgtaagtggtctaaagcacag[C/T]atctaaaacctagtaagagatcaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | 1.42 | -0.40 | 2.50 |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, hdl cholesterol change with statins, hip bone mineral density (bmd), mitral annular calcium, primary rhegmatogenous retinal detachment, tetrology of fallot, total cholesterol change with statins, variant creutzfeldt-jakob disease