rs298758 chr3:164480378 T>C
- Sequence
gattcattaattaatacatgttta[T/C]tgaacccttagaatgcttctcatt
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.19 | 0.76 | 1.50 | 1.88 | Weak Concordant |
Items per page:
1 – 1 of 1
Motif analysis
Genetic associations
GRASP homa-ir, ldl cholesterol, obesity with early age of onset (age >2), pericardial fat, rheumatoid arthritis, serum creatinine, total cholesterol change with statins