rs29963 chr5:94361940 T>A
- Sequence
aaacttacacacactgaagaacag[T/A]gtgtgcagaacaggctgcaagaac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- GCR_HUMAN PRGR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.83 | 1.93 | 2.67 | 7.81 | Concordant | |||
| PRGR_HUMAN | -3.03 | 2.18 | 2.50 | 3.52 | Concordant |
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Motif analysis
