rs300538 chr7:4830382 G>A
- Sequence
ctgcacgtctgtatcagatcaacc[G/A]aatggtttcccaagtgccccagca
- ASB in cell types
- K562 (myelogenous leukemia) PANC1 (pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN MTG16_HUMAN HTF4_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.42 | 0.90 | 1.36 | n/a | No Hit | |||
| MTG16_HUMAN | n/a | 2.55 | 2.00 | n/a | n/a | |||
| HTF4_HUMAN | n/a | 1.62 | 2.00 | n/a | No Hit | |||
| EGR1_HUMAN | -0.19 | 1.64 | 2.00 | n/a | No Hit |
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