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rs3008328 chr10:133279086 G>C

Sequence
attgggtgtcagtctgctgagtaa[G/C]ttctacgtaacaaggcggtaccgg
ASB in cell types
SK-BR-3 (breast adenocarcinoma) RWPE2
ASB for transcription factors
AP2C_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
AP2C_HUMAN n/a 2.65 1.005.6·10-4 2.00 n/a No Hit
CTCF_HUMAN -1.46 1.53 1.000.02 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP panic disorder
GTEx eQTL Artery_Aorta Brain_Nucleus_accumbens_basal_ganglia Esophagus_Mucosa Esophagus_Muscularis Lung Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Whole_Blood

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