ADASTRA v1.6.10
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adastra.autosome.org
rs300917
chr4:143348696
C
>
G
Sequence
ttccatagctcgaagctgttctgc[C/G]gcgctcttttgctcttcggagtgc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN
HDAC1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN
n/a
0.54
1.00
0.02
2.00
n/a
n/a
HDAC1_HUMAN
-0.59
1.69
0.99
0.03
2.00
n/a
n/a
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5
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Motif analysis
No data available
Genetic associations
GRASP
biploar disorder (bipolar schizoaffective disorder)
,
hdl cholesterol
,
height
,
hypertension
,
serum creatinine
GTEx eQTL
Brain_Cortex
,
Brain_Nucleus_accumbens_basal_ganglia
,
Esophagus_Mucosa
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)