rs30156 chr5:157219995 C>T
- Sequence
tggaatcattgttctagtttcaac[C/T]gcatgtctaaatccaatgcaacgg
- ASB in cell types
- GM12878 (female B-cells) Th1-cells
- ASB for transcription factors
- RUNX3_HUMAN MYB_HUMAN BATF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RUNX3_HUMAN | 2.80 | -3.22 | 1.33 | -4.44 | Concordant | |||
| MYB_HUMAN | 2.48 | n/a | 2.50 | 2.41 | Discordant | |||
| BATF_HUMAN | 2.00 | n/a | 1.33 | n/a | No Hit |
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Motif analysis
