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rs301797 chr1:8427263 C>A

Sequence
tttgaactctcctaacagagctga[C/A]ctcttgctccatgatgccaaactc
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.80 1.21 1.000.03 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI schizophrenia
GRASP chronic kidney disease fasting blood glucose ldl cholesterol total cholesterol
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cortex Brain_Hippocampus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Thyroid Whole_Blood

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