rs301873 chr5:37136896 C>G
- Sequence
cacagcaaggagggcctgggcctg[C/G]cccaggaaaccatttttccctcct
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- TTP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TTP_HUMAN | n/a | 2.70 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Coronary, Artery_Tibial, Breast_Mammary_Tissue, Cells_EBV-transformed_lymphocytes, Lung, Nerve_Tibial, Thyroid, Whole_Blood