rs30569 chr7:32034244 A>G
- Sequence
tcatgaacttctaaaagcaaaatg[A/G]ggaagaaattaagccctcttgtgg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) pancreas foreskin keratinocyte LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN GRHL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.36 | 1.31 | 1.72 | n/a | No Hit | |||
| GRHL2_HUMAN | 1.51 | -0.48 | 1.50 | n/a | No Hit |
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