rs30618 chr5:14272827 A>C
- Sequence
cgttatctcctttaggagggaaaa[A/C]aaccataaaattaagtagaaattg
- ASB in cell types
- K562 (myelogenous leukemia) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.42 | 1.61 | 1.43 | n/a | No Hit | |||
| ATF7_HUMAN | 1.41 | -1.68 | 1.33 | n/a | n/a |
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