rs306588 chr10:30434664 G>A
- Sequence
cagggcagtgctggtctgggcagt[G/A]cgcggggaagcggggacccgctgt
- ASB in cell types
- K562 (myelogenous leukemia) keratinocytes GM12878 (female B-cells)
- ASB for transcription factors
- SNAI2_HUMAN FOXK2_HUMAN NRF1_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | n/a | 3.01 | 1.50 | n/a | No Hit | |||
| FOXK2_HUMAN | -2.53 | 2.44 | 1.33 | n/a | n/a | |||
| NRF1_HUMAN | 1.76 | -0.68 | 2.17 | n/a | No Hit | |||
| EGR1_HUMAN | 1.90 | -0.89 | 2.00 | n/a | No Hit | |||
| ENL_HUMAN | 2.04 | -0.60 | 2.00 | n/a | n/a |
Items per page:
1 – 5 of 7