ADASTRA v1.6.10
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adastra.autosome.org
rs307739
chr8:141182470
G
>
A
Sequence
tccacagaccaagatactttgacc[G/A]tggcatttgaatacatggtatttt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MTA2_HUMAN
IKZF2_HUMAN
COT1_HUMAN
Search SNPs nearby
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View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTA2_HUMAN
1.90
-2.14
0.02
1.00
1.33
n/a
n/a
IKZF2_HUMAN
1.02
-0.30
0.04
1.00
1.33
n/a
n/a
COT1_HUMAN
1.61
-1.49
0.04
1.00
1.33
n/a
No Hit
Items per page:
5
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Motif analysis
No data available
Genetic associations
GRASP
autism
,
hip bone mineral density (bmd)
,
spine bone mineral density (bmd)
GTEx eQTL
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Nerve_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)