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rs307739 chr8:141182470 G>A

Sequence
tccacagaccaagatactttgacc[G/A]tggcatttgaatacatggtatttt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MTA2_HUMAN IKZF2_HUMAN COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTA2_HUMAN 1.90 -2.14 0.021.00 1.33 n/a n/a
IKZF2_HUMAN 1.02 -0.30 0.041.00 1.33 n/a n/a
COT1_HUMAN 1.61 -1.49 0.041.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP autism hip bone mineral density (bmd) spine bone mineral density (bmd)
GTEx eQTL Cells_Cultured_fibroblasts Colon_Sigmoid Nerve_Tibial

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