rs307748 chr8:141154347 C>T
- Sequence
catatctcaaatattccagggcta[C/T]gcggtctcttagcccaggcccctg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HAEC (human aortic endothelial cells) A549 (lung carcinoma)
- ASB for transcription factors
- TF65_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | -1.67 | 2.27 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.48 | 0.89 | 1.89 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, asthma, bipolar disorder, height, ldl cholesterol, maternal transmission distortion, premature ovarian failure, transmission distortion