ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs310619
chr20:63496168
G
>
A
Sequence
tccagcacccccttgctctccgtc[G/A]gggtcctgggacgccggccccctc
ASB in cell types
K562 (myelogenous leukemia)
HEK293 (embryonic kidney)
foreskin keratinocyte
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.11
0.72
0.88
3.2·10
-5
1.96
HEK293 (embryonic kidney)
0.60
-0.17
6.9·10
-3
1.00
2.07
foreskin keratinocyte
0.37
n/a
0.04
1.00
2.50
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
body mass index (bmi)
,
height
,
salmonella-induced pyroptosis
GTEx eQTL
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale