rs310624 chr20:63520619 C>G
- Sequence
gcccaagccagacggcgagagtcg[C/G]accgaggtggaagctgggggcgcg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZN316_HUMAN VEZF1_HUMAN RING2_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN316_HUMAN | n/a | 2.07 | 2.00 | n/a | n/a | |||
| VEZF1_HUMAN | -3.08 | 2.37 | 2.00 | n/a | No Hit | |||
| RING2_HUMAN | -3.23 | 2.32 | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 1.19 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Colon_Transverse, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg