rs310871 chr12:77011216 C>G
- Sequence
ccttccgatggttttgctcacgtg[C/G]ccctgaaaataattttgaaaactt
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) upper lobe of left lung
- ASB for transcription factors
- CTCF_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.40 | 0.60 | 1.35 | n/a | No Hit | |||
| BHE40_HUMAN | 1.97 | -2.22 | 1.33 | -7.25 | Concordant |
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Motif analysis
