ADASTRA v1.6.10
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rs311358
chr19:46860134
A
>
G
Sequence
tggctgcagattttcttcacagcc[A/G]ggagaaagagcacgcgctctccag
ASB in cell types
HEK293 (embryonic kidney)
GM12878 (female B-cells)
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.84
-0.03
5.6·10
-13
1.00
1.78
GM12878 (female B-cells)
0.72
0.60
3.2·10
-3
0.74
1.29
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Motif analysis
No data available
Genetic associations
GRASP
infant head circumference
,
triglycerides change with statins
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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