rs311434 chr1:24990794 A>G
- Sequence
caccatcaacttggctttcatccc[A/G]tcagcttccaccctctgtgaaaga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFIC_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | 2.03 | -2.06 | 1.33 | -0.30 | Weak Concordant | |||
| COT1_HUMAN | 1.69 | 0.92 | 1.67 | n/a | No Hit |
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Motif analysis
