rs312984 chr2:21155906 C>T
- Sequence
gtacttttgaaacacaggtttaag[C/T]gctttgggtatcaggagctgcatt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA1_HUMAN FOXA2_HUMAN BCL6_HUMAN FOXP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.79 | -0.59 | 2.00 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.10 | -1.32 | 1.78 | n/a | No Hit | |||
| BCL6_HUMAN | 2.47 | n/a | 2.00 | n/a | No Hit | |||
| FOXP1_HUMAN | 2.10 | -2.35 | 2.00 | n/a | No Hit | |||
| HNF1A_HUMAN | 2.02 | -1.71 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg