ADASTRA v1.6.10
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rs313327
chr12:104580243
C
>
T
Sequence
agatttcaggcttgagctggagta[C/T]gaaaggaaattgaaactaaagatt
ASB in cell types
CD14+ monocytes
K562 (myelogenous leukemia)
GM12878 (female B-cells)
ASB for transcription factors
STAT1_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
n/a
2.18
1.00
8.9·10
-3
2.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
alzheimers disease
,
birth weight
,
paternal transmission distortion
,
schizophrenia
,
transmission distortion
,
variant creutzfeldt-jakob disease
,
years of education
GTEx eQTL
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)