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rs313853 chr19:46784682 T>C

Sequence
tttgggggcccgcctgcacgcaaa[T/C]acagcccctactcatgcctcagcc
ASB in cell types
HEK293 (embryonic kidney) cranial neural crest cells
ASB for transcription factors
CTCF_HUMAN AP2A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.77 0.37 0.041.00 1.45 n/a No Hit
AP2A_HUMAN 1.53 -1.41 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels chronic kidney disease ldl cholesterol total cholesterol years of education
GTEx eQTL Artery_Tibial Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Mucosa Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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