rs314073 chr4:188373111 T>C
- Sequence
tggccacatggagcatgtgtatct[T/C]ggagaagaacattgctgacctctg
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma) VCaP (prostate carcinoma) HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN MAX_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.59 | 0.65 | 1.64 | n/a | No Hit | |||
| RAD21_HUMAN | 1.60 | -0.18 | 1.33 | n/a | n/a | |||
| SMC3_HUMAN | 1.30 | -0.49 | 2.03 | n/a | n/a | |||
| MAX_HUMAN | 1.39 | -0.27 | 1.56 | n/a | No Hit |
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