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rs31488 chr5:1342042 A>G

Sequence
gtgtgtgtgtgtgtgtgtgtgtgc[A/G]cgcgcacgcgtgcgcgtcctgaga
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
BHE40_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN 1.58 -1.85 2.3·10-41.00 1.33 n/a No Hit
IKZF1_HUMAN 1.42 -0.52 0.031.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach

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