ADASTRA v1.6.10
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rs31488
chr5:1342042
A
>
G
Sequence
gtgtgtgtgtgtgtgtgtgtgtgc[A/G]cgcgcacgcgtgcgcgtcctgaga
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
BHE40_HUMAN
IKZF1_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN
1.58
-1.85
2.3·10
-4
1.00
1.33
n/a
No Hit
IKZF1_HUMAN
1.42
-0.52
0.03
1.00
1.33
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)