rs31534 chr5:135945381 T>A
- Sequence
ggatgattatttggaaaactaagc[T/A]tatattttattgtgcaaatatttc
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.71 | -0.42 | 1.90 | n/a | n/a | |||
| CTCF_HUMAN | 0.67 | 0.53 | 1.40 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Spleen, Thyroid