rs316000 chr6:160221496 G>A
- Sequence
caagaacttttcctgtgcattctc[G/A]acttggctacctggtacaagagtc
- ASB in cell types
- foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.20 | 1.58 | 1.62 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, mitral annular calcium, paternal transmission distortion, prop taste detection threshold, transmission distortion
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis