rs318464 chr6:2940515 C>T
- Sequence
aagtgggtgagatgacgagcccgg[C/T]aggaggaacgaaacactcatctgt
- ASB in cell types
- K562 (myelogenous leukemia) MDA231-LM2-4175 (breast adenocarcinoma)
- ASB for transcription factors
- E2F1_HUMAN KAISO_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| E2F1_HUMAN | 2.30 | n/a | 2.00 | -3.82 | Concordant | |||
| KAISO_HUMAN | n/a | 2.29 | 3.00 | n/a | No Hit |
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Motif analysis
