rs319915 chr5:104937138 C>A
- Sequence
ttctaaggttattgccgtaaagta[C/A]atgttaacattcattaacattccc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -2.46 | 1.64 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), hypertension (early onset hypertension), neuroblastoma (brain cancer), obesity with early age of onset (age >2), triglycerides change with statins