rs321599 chr17:35578726 C>T
- Sequence
gccccgctgaaacagaagagggcc[C/T]ttgtgggctggttttggctagttt
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma)
- ASB for transcription factors
- GABPA_HUMAN HDAC1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 0.45 | 1.68 | 1.81 | n/a | No Hit | |||
| HDAC1_HUMAN | -0.13 | 1.97 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | -0.14 | 1.24 | 1.60 | n/a | No Hit |
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