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rs322188 chr17:27381393 G>A

Sequence
cgccttggaggccgtatctcacca[G/A]ccggcaggaggtccctgcatcagg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
REST_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN -1.80 2.26 1.000.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) hdl cholesterol
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Testis Whole_Blood

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