ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs322353
chr5:172765865
T
>
C
Sequence
ggtcattttacggggtgggaaaac[T/C]gagccagaagaactgccagaagcc
ASB in cell types
K562 (myelogenous leukemia)
GM12878 (female B-cells)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.20
0.96
1.00
1.3·10
-32
1.99
GM12878 (female B-cells)
0.46
0.15
0.02
0.86
1.28
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
red cell distribution width
GRASP
hdl cholesterol
,
ldl cholesterol change with statins
,
rheumatoid arthritis
,
salmonella-induced pyroptosis
,
tetrology of fallot
,
total cholesterol
,
triglycerides change with statins
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale