rs322380 chr5:172772589 T>C
- Sequence
gaggggatttcgctggccaccctg[T/C]gtcgtcgctgtgcgagctgtatca
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) macrophages monocyte-derived macrophages
- ASB for transcription factors
- CEBPB_HUMAN JUN_HUMAN TF65_HUMAN BCL3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 0.36 | 1.54 | 1.77 | n/a | No Hit | |||
| JUN_HUMAN | -0.57 | 1.64 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | -0.92 | 2.95 | 2.25 | n/a | No Hit | |||
| BCL3_HUMAN | -0.48 | 1.45 | 2.00 | n/a | n/a | |||
| JUNB_HUMAN | -1.35 | 1.71 | 2.25 | n/a | No Hit |
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Motif analysis
