rs322381 chr5:172772486 G>A
- Sequence
cctgctgcagcgacgcgacgcgct[G/A]ggtacacaaacataaacattgcgc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- RFX1_HUMAN HTF4_HUMAN NCOR1_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | -2.24 | 2.22 | 2.00 | n/a | No Hit | |||
| HTF4_HUMAN | -0.77 | 2.30 | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | -1.30 | 1.93 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -1.67 | 1.92 | 2.00 | n/a | n/a | |||
| PKNX1_HUMAN | -3.11 | 2.39 | 2.00 | n/a | No Hit |
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