rs322387 chr5:172729004 G>A
- Sequence
cctagctggtcattagccaagctg[G/A]gatttgaacccagacctctggcct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | -1.09 | 1.64 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP homa-ir, ldl cholesterol, refractive error, total cholesterol change with statins, urinary albumin-to-creatinine ratio