ADASTRA v1.6.10
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adastra.autosome.org
rs326338
chr3:108124157
T
>
C
Sequence
agggcagaagatatgggtttgagg[T/C]cctgatgtactctgcctgctgtgt
ASB in cell types
GM12878 (female B-cells)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells)
0.63
0.53
9.4·10
-4
0.47
1.28
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5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
homa-ir
,
systolic blood pressure (sbp)
GTEx eQTL
Cells_EBV-transformed_lymphocytes
,
Kidney_Cortex
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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