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rs327294 chr5:38649655 G>A

Sequence
ccttatggagagtgtaatgattag[G/A]tttgtgcgcccccccatcccccca
ASB in cell types
induced pluripotent stem cells
ASB for transcription factors
DUX4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN 1.99 -1.79 0.011.00 1.33 -0.36 Weak Concordant
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Motif analysis

DUX4_HUMAN Weak Concordant
DUX4_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) college completion fasting blood glucose parkinsons disease refractive error
GTEx eQTL Artery_Tibial Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Testis Thyroid

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