rs32880 chr5:82969166 G>A
- Sequence
gaagaaaagtcagcatggagacaa[G/A]tgatctcacaacaaggccatcttt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- RFX5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX5_HUMAN | 2.68 | n/a | 3.00 | -0.55 | Weak Concordant |
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Motif analysis
