rs329117 chr5:134524410 T>C
- Sequence
ccagaaactgcgaggatccgagcg[T/C]actgtttgtgcaccacaaggtcaa
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- JUN_HUMAN RAD21_HUMAN SMC3_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.36 | -0.42 | 2.00 | n/a | No Hit | |||
| RAD21_HUMAN | 0.81 | -0.15 | 1.90 | n/a | n/a | |||
| SMC3_HUMAN | 0.88 | -0.17 | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | -3.41 | 1.54 | 1.75 | n/a | No Hit |
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