ADASTRA v1.6.10
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rs329166
chr5:125798550
C
>
A
Sequence
gaatgaaacatttagggatttacc[C/A]aatgcttcataagccagaatatga
ASB in cell types
A549 (lung carcinoma)
K562 (myelogenous leukemia)
ASB for transcription factors
REST_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN
0.63
1.62
0.28
0.04
1.86
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
infant head circumference
,
neuroticism
,
parkinsons disease
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)