rs32921 chr5:94968619 G>A
- Sequence
aaaaaggatttagtttgttggttc[G/A]aaagactcaaaaaaatcaatagct
- ASB in cell types
- A549 (lung carcinoma) K562 (myelogenous leukemia) foreskin keratinocyte
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN REST_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.06 | -0.45 | 1.88 | n/a | n/a | |||
| RAD21_HUMAN | 1.12 | 0.33 | 1.73 | n/a | n/a | |||
| REST_HUMAN | n/a | 2.20 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.62 | 0.66 | 1.57 | n/a | No Hit |
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