rs329253 chr7:35025514 G>A
- Sequence
ggttaagaagaggtgggtggggga[G/A]gtggtgggagtagcagcctcaaga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN P53_HUMAN AHR_HUMAN P66B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.48 | 1.80 | 2.42 | n/a | No Hit | |||
| P53_HUMAN | n/a | 2.68 | 1.50 | n/a | No Hit | |||
| AHR_HUMAN | -0.56 | 1.49 | 1.50 | n/a | No Hit | |||
| P66B_HUMAN | -1.31 | 1.47 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Muscularis, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood