rs33027 chr5:14180634 G>C
- Sequence
gatcgcttgaggccaggaatttga[G/C]actagtctgggcaacatagcaaga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- SIX4_HUMAN PKNX1_HUMAN AHRR_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SIX4_HUMAN | n/a | 3.13 | 2.50 | n/a | n/a | |||
| PKNX1_HUMAN | n/a | 2.54 | 2.00 | n/a | No Hit | |||
| AHRR_HUMAN | -2.70 | 2.38 | 2.50 | n/a | n/a | |||
| GATA3_HUMAN | -2.64 | 1.02 | 2.17 | n/a | No Hit | |||
| SMCE1_HUMAN | n/a | 2.44 | 2.50 | n/a | n/a |
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